This thread in the DevonThink forums talks about various uses of DTP, but focusing on the “how to organize your Devon Think library.” There are multiple ways, each having its benefits — after all YOU need to be working with it, so in a way the structure might resemble the way you think or work. But it all comes down to utilizing the powers of teh DevonThink AI: group stuff together that needs to be grouped. Group similar stuff. File Things wherever they might belong. This way the AI learns and will help you later when filing new stuff where it might belong to.
You could also tag your files (e.g. via their comments) and then grab the tagged files via a smart folder (see 43Folders for a detailed article on this). btw a very useful feature that can also be used in Finder.app: You can very easily set finder/spotlight comments via a Quicksilver-Plugin and then assemble all related items with a smart folder (or saved search from spotlight). e.g. I have a projects.smartfolder that contains all my current projects’ folders (tagged with “@project,” of course), no matter where they are. You could also be more specific and just get all files tagged with “@recipe” and “@baking”… you get the idea.
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